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Apr 04, 2022
by
Rémy Mozul
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@@ -7,9 +7,9 @@ Here are provided some very basics directions on how to use LMGC90 in a Singular
...
@@ -7,9 +7,9 @@ Here are provided some very basics directions on how to use LMGC90 in a Singular
On how to install and use Singularity properly, check their
[
official website
](
https://sylabs.io/guides/3.6/user-guide/
)
.
On how to install and use Singularity properly, check their
[
official website
](
https://sylabs.io/guides/3.6/user-guide/
)
.
For a direct use, download the image file:
For a direct use, download the image file:
*
[
lmgc90_user_2022_rc1.sif
](
https://seafile.lmgc.univ-montp2.fr/f/f4893573742242c08d7a/?dl=1
)
*
[
lmgc90_user_2021.sif
](
https://seafile.lmgc.univ-montp2.fr/f/df2a8b99d59d4055add3/?dl=1
)
*
[
lmgc90_user_2021.sif
](
https://seafile.lmgc.univ-montp2.fr/f/df2a8b99d59d4055add3/?dl=1
)
*
[
lmgc90_user_2021_rc1.sif
](
https://seafile.lmgc.univ-montp2.fr/f/5c8dd98a597042aa96ad/?dl=1
)
*
[
lmgc90_user_2021_rc1.sif
](
https://seafile.lmgc.univ-montp2.fr/f/5c8dd98a597042aa96ad/?dl=1
)
*
[
lmgc90_user_2020.sif
](
https://seafile.lmgc.univ-montp2.fr/f/f6b75bb93927479cbf28/?dl=1
)
On a server or computer with singularity installed, you can directly use the
On a server or computer with singularity installed, you can directly use the
singularity image to run a single command with:
singularity image to run a single command with:
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@@ -45,8 +45,8 @@ From: ubuntu:focal
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@@ -45,8 +45,8 @@ From: ubuntu:focal
# install packages
# install packages
export DEBIAN_FRONTEND=noninteractive
export DEBIAN_FRONTEND=noninteractive
apt update && apt -y upgrade
apt update && apt -y upgrade
apt install -y git cmake gcc g++ gfortran liblapack-dev swig python3-dev python3-numpy
python3-scipy p
ython3
-vtk7
python-is-python3
apt install -y git cmake gcc g++ gfortran liblapack-dev swig python3-dev python3-numpy
c
ython3 python-is-python3
apt install -y
cython3
apt install -y
python3-scipy python3-matplotlib python3-pandas python3-vtk7
apt install -y libhdf5-dev hdf5-tools python3-h5py
apt install -y libhdf5-dev hdf5-tools python3-h5py
# build the sources
# build the sources
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