container.md

@@ -73,20 +73,20 @@ To build an image, use the following content to create a `docker_lmgc90` file.
 FROM ubuntu:focal
 
 # install packages
-RUN apt-get update  -y
-RUN apt-get upgrade -y
+RUN apt update  -y
+RUN apt upgrade -y
 
 RUN DEBIAN_FRONTEND=noninteractive apt-get install -y tzdata
-RUN apt-get install -y git cmake gcc g++ gfortran liblapack-dev swig python3-dev python3-numpy python3-scipy python3-vtk7 python-is-python3
-RUN apt-get install -y cython3
-RUN apt-get install -y libhdf5-dev hdf5-tools python3-h5py
+RUN apt install -y git cmake gcc g++ gfortran liblapack-dev swig python3-dev python3-numpy cython3 python-is-python3
+RUN apt install -y python3-scipy python3-matplotlib python3-pandas python3-vtk7
+RUN apt install -y libhdf5-dev hdf5-tools python3-h5py
 
 # get the sources
 COPY lmgc90_user_xxxx /root/lmgc90
 
 # build the sources
 WORKDIR /root/lmgc90/build
-RUN cmake ../ -DWITH_HDF5=ON -DNO_INSTALL=FALSE
+RUN cmake ../ -DWITH_HDF5=ON -DNO_INSTALL=FALSE -DWITH_OPENMP=True
 RUN make && make install
 
 # clean build and source directories
@@ -103,7 +103,7 @@ Then, next to a `example` directory containing a `gen_sample.py` (with
 NO `visuAvatars` command) and a `command.py`, a docker container
 can be run sharing the `example` directory and run a single command with:
 ```cmd
-docker run -it -v $PWD/example:/root/compute lmgc90_user:2020.rc1 python command.py
+docker run -it -v $PWD/example:/root/compute lmgc90_user:2022.rc1 python command.py
 ```
 To stay in the container for, let's say run python in interactive mode, or run 
 several commands, preferably use: